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microbial diseases laboratory branch

Tes​​t​​ Name 

Cyclospora ​​Targeted Amplicon Deep Sequencing 

​

​Test ā€‹ā€‹ā€‹ā€‹ā€‹M​​​e​th​o​​​​d​​​olog​y​
 ā€‹ā€‹Next Generation Sequencing​

​Reflex Testing
Criteria
​
​None
​Pre-A​pproval Required​​
​
​Yes.​ Please contact MDL at MDL.Submissio​ns@CDPH​.ca.gov ā€‹
​Supp​lemental Information and Required Form(s)​
​
​​Test Request Form for Cyclospora Targeted Amplicon Deep Sequencing (TADS). The submission form will be shared once shipment is approved.​​
​Requir​ed Specimen Type(s)​
​​Stool specimen submitted either in a Cary Blair or at least 3 aliquots in 2 mL sterile microcentrifuge tubes. Please secure top of container/ tubes with parafilm to avoid leakage during transport. 

​Minimum Volume Required
​
If submitted in microcentrifuge tube, 2 mL.

​Specimen Stability​

4​°C up to 15 days 

​​Rejection Criteria​

​​Specimens collected in Formalin will be rejected

Storage/Transport​
Conditions
​
​
​4​°C,  ā€‹-20°C or other (please indicate on Test Request Form)

​Transport Medium,​
if applicable
​

​Cary-Blair modified media or VTM (Viral Transport Media)​​

​​Spe​cimen Labeling​
​​Containing patient identifiers: name, DOB, and collection date

​Shipping Instructions and Specimen Handling Requirements​
​​​​​Specimen(s) should be shipped according to International Air Transport Association (IATA) and International Civil Aviation Organization (ICAO) regulations for biological specimens.​​

Ship to:

California Depart​ment of Public Health​
Microbial Diseases Laboratory ​
ATTN:  ​​Molecular Characterization Unit​​
850 Marina Bay Parkway, Specimen Receiving Room B106
Richmond, CA  94804
​Spec​​imen Collection Instructions, if applicable

​Not Applicable
​Turnaround Time

​​Not Applicable​
​​Interferences & Limitations​
None​
​Reference Range​

​​Not Applicable​​​​
​Additional Information​
​None
​​MDL Point of Contact​

​MDL - Molecular Characterization Unit 
Phone: (510) 412-3940, M–F PST.​
Email MDL.Submissions@CDPH.ca.gov 
​
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